-Genomic Data Links
Protein
Lbx2
UniPROBE Accession Number
UP00120
Species
Mus musculus
Domain
Homeobox
Uniprot
Q32M12
Name and Synonyms
ladybird homeobox homolog 2 (Drosophila)
Lbx2h, MGC130325
IHOP
122482
Description
None Available
RefSeq
NP_034822
Lbx2 DNA binding domain
1   RKSRTAFTAQ QVLELERRFV FQKYLAPSER DGLAARLGLA NAQVVTWFQN
51  RRAKLKR
JASPAR
None Available
-PBM Motif Data for Lbx2
Primary Motif  (Seed-and-Wobble)
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Primary PWM
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Top Kmer
CTAATTAG (E.S. 0.49768)
CTAATTAG (E.S. 0.49768)
Primary Motif  (BEEML-PBM)
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Primary PWM
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Consensus
NNHAANNRNN
NNYNNTTDNN
Downloads
Download the zip of all Lbx2 PBM files or view the downloads directory for individual files. Please note that the files which include probe sequence data are protected by an academic research use license, which can be viewed here.
Link to TFBSshape
This link will take you to the corresponding entry for Lbx2 in TFBSshape, a database which provides information about the shape of the DNA at transcription factor binding sites.

http://rohslab.cmb.usc.edu/TFBSshape/?tfid=&geneID=120&sourceDB=uniprobe
-Lbx2 Datasets
Clone ID Expression Expression Method Save View
pTH3869 #1 E. coli save search
Clone pTH3869 insert sequence
1   AAPEAPPGPG AGVRRRRKSR TAFTAQQVLE LERRFVFQKY LAPSERDGLA
51  ARLGLANAQV VTWFQNRRAK LKRDVEEMRA DVASLCGLSP GVL
References
Data are analyzed by array design with AMADID # 015681 in Berger et al., Cell 2008


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