-Genomic Data Links
Protein
Tgif1
UniPROBE Accession Number
UP00122
Species
Mus musculus
Domain
Homeobox
Uniprot
None Available
Name and Synonyms
TGFB-induced factor 2
None Available
IHOP
None Available
Description
None Available
RefSeq
None Available
Tgif1 DNA binding domain
1   RRRRGNLPKE SVQILRDWLY EHRYNAYPSE QEKALLSQQT HLSTLQVCNW
51  FINARRRLLP
JASPAR
None Available
-PBM Motif Data for Tgif1
Primary Motif  (Seed-and-Wobble)
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Primary PWM
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Top Kmer
A.TGACAGC (E.S. 0.49876)
GCTGTCA.T (E.S. 0.49876)
Primary Motif  (BEEML-PBM)
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Primary PWM
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Consensus
NNTGACANNN
NNNTGTCANN
Downloads
Download the zip of all Tgif1 PBM files or view the downloads directory for individual files. Please note that the files which include probe sequence data are protected by an academic research use license, which can be viewed here.
Link to TFBSshape
This link will take you to the corresponding entry for Tgif1 in TFBSshape, a database which provides information about the shape of the DNA at transcription factor binding sites.

http://rohslab.cmb.usc.edu/TFBSshape/?tfid=&geneID=122&sourceDB=uniprobe
-Tgif1 Datasets
Clone ID Expression Expression Method Save View
pTH2342 #1 E. coli save search
Clone pTH2342 insert sequence
1   SMDSPLDLSS SAASGKRRRR GNLPKESVQI LRDWLYEHRY NAYPSEQEKA
51  LLSQQTHLST LQVCNWFINA RRRLLPDMLR KDGKDPNQFT ISRRGA
References
Data are analyzed by array design with AMADID # 015681 in Berger et al., Cell 2008


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