-Genomic Data Links
Protein
Pitx2
UniPROBE Accession Number
UP00125
Species
Mus musculus
Domain
Homeobox
Uniprot
P97474
Name and Synonyms
paired-like homeodomain transcription factor 2
9430085M16Rik, ALL1-responsive protein ARP1, Arp1, Brx1, Brx1a, Brx1b, BRX1 homeoprotein, Munc30, Orthodenticle-like homeobox 2, Otlx2, Paired-like homeodomain transcription factor Munc 30, Pituitary homeobox 2, Pitx2a, Pitx2b, Pitx2c, Ptx2, Rgs, Rieg, solurshin, Solurshin
IHOP
123559
Description
None Available
RefSeq
NP_035228
Pitx2 DNA binding domain
1   RRQRTHFTSQ QLQELEATFQ RNRYPDMSTR EEIAVWTNLT EARVRVWFKN
51  RRAKWRK
JASPAR
None Available
-PBM Motif Data for Pitx2
Primary Motif  (Seed-and-Wobble)
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Primary PWM
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Top Kmer
GGGATTAA (E.S. 0.49686)
TTAATCCC (E.S. 0.49686)
Primary Motif  (BEEML-PBM)
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Primary PWM
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Consensus
NNGGATTANN
NNTAATCCNN
Downloads
Download the zip of all Pitx2 PBM files or view the downloads directory for individual files. Please note that the files which include probe sequence data are protected by an academic research use license, which can be viewed here.
Link to TFBSshape
This link will take you to the corresponding entry for Pitx2 in TFBSshape, a database which provides information about the shape of the DNA at transcription factor binding sites.

http://rohslab.cmb.usc.edu/TFBSshape/?tfid=&geneID=125&sourceDB=uniprobe
-Pitx2 Datasets
Clone ID Expression Expression Method Save View
pTH2274 #1 E. coli save search
Clone pTH2274 insert sequence
1   KNEDVGAEDP SKKKRQRRQR THFTSQQLQE LEATFQRNRY PDMSTREEIA
51  VWTNLTEARV RVWFKNRRAK WRKRERNQQA ELCKNGFGPQ FNG
References
Data are analyzed by array design with AMADID # 015681 in Berger et al., Cell 2008


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