-Genomic Data Links
Protein
Pou3f2
UniPROBE Accession Number
UP00128
Species
Mus musculus
Domain
Homeobox, POU
Uniprot
P31360
Name and Synonyms
POU domain, class 3, transcription factor 2
9430075J19Rik, A230098E07Rik, Brain-2, Brain-specific homeobox/POU domain protein 2, Brn2, Brn-2, Nervous system-specific octamer-binding transcription factor N-Oct-3, Otf7, Protein Brn-2
IHOP
123679
Description
None Available
RefSeq
NP_032925
Pou3f2 DNA binding domain
1   RKKRTSIEVS VKGALESHFL KCPKPSAQEI TSLADSLQLE KEVVRVWFCN
51  RRQKEKR
JASPAR
None Available
-PBM Motif Data for Pou3f2
Primary Motif  (Seed-and-Wobble)
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Primary PWM
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Top Kmer
A.TTAATTA (E.S. 0.49759)
TAATTAA.T (E.S. 0.49759)
Primary Motif  (BEEML-PBM)
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Primary PWM
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Consensus
NNNVATWWNN
NNWWATBNNN
Downloads
Download the zip of all Pou3f2 PBM files or view the downloads directory for individual files. Please note that the files which include probe sequence data are protected by an academic research use license, which can be viewed here.
Link to TFBSshape
This link will take you to the corresponding entry for Pou3f2 in TFBSshape, a database which provides information about the shape of the DNA at transcription factor binding sites.

http://rohslab.cmb.usc.edu/TFBSshape/?tfid=&geneID=128&sourceDB=uniprobe
-Pou3f2 Datasets
Clone ID Expression Expression Method Save View
pTH2824 #1 IVT save search
Clone pTH2824 insert sequence
1    GPPGHPGAHH DPHSDEDTPT SDDLEQFAKQ FKQRRIKLGF TQADVGLALG
51   TLYGNVFSQT TICRFEALQL SFKNMCKLKP LLNKWLEEAD SSSGSPTSID
101  KIAAQGRKRK KRTSIEVSVK GALESHFLKC PKPSAQEITS LADSLQLEKE
151  VVRVWFCNRR QKEKRMTPPG GTLPGAEDVY GGSRD
References
Data are analyzed by array design with AMADID # 015681 in Berger et al., Cell 2008


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