-Genomic Data Links
Protein
Bsx
UniPROBE Accession Number
UP00138
Species
Mus musculus
Domain
Homeobox
Uniprot
Q810B3
Name and Synonyms
brain specific homeobox
Brain-specific homeobox protein homolog, MGC129478, MGC129479
IHOP
155597
Description
None Available
RefSeq
NP_839976
Bsx DNA binding domain
1   RKARTVFSDS QLSGLEKRFE IQRYLSTPER VELATALSLS ETQVKTWFQN
51  RRMKHKK
JASPAR
None Available
-PBM Motif Data for Bsx
Primary Motif  (Seed-and-Wobble)
Image Not Available. We apologize for the inconvenience.
Primary PWM
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Top Kmer
G.TAATTA.C (E.S. 0.49562)
G.TAATTA.C (E.S. 0.49562)
Primary Motif  (BEEML-PBM)
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Primary PWM
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Consensus
NNHVRTTANN
NNTAAYBDNN
Downloads
Download the zip of all Bsx PBM files or view the downloads directory for individual files. Please note that the files which include probe sequence data are protected by an academic research use license, which can be viewed here.
Link to TFBSshape
This link will take you to the corresponding entry for Bsx in TFBSshape, a database which provides information about the shape of the DNA at transcription factor binding sites.

http://rohslab.cmb.usc.edu/TFBSshape/?tfid=&geneID=138&sourceDB=uniprobe
-Bsx Datasets
Clone ID Expression Expression Method Save View
pTH3483 #1 E. coli save search
Clone pTH3483 insert sequence
1   FPHPQHAELP GKHCRRRKAR TVFSDSQLSG LEKRFEIQRY LSTPERVELA
51  TALSLSETQV KTWFQNRRMK HKKQLRKSQD EPKAADGPES PEG
References
Data are analyzed by array design with AMADID # 015681 in Berger et al., Cell 2008


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