-Genomic Data Links
Protein
Dobox5
UniPROBE Accession Number
UP00143
Species
Mus musculus
Domain
Homeobox
Uniprot
None Available
Name and Synonyms
None Available
None Available
IHOP
None Available
Description
Formerly named ENSMUST00000057964.5
RefSeq
None Available
Dobox5 DNA binding domain
1   RKQHTVYSKE QQHLLKEHFK ECQYPNEKKI VELAVLVGVT KMEIKIWMNL
51  QNIKQAL
JASPAR
None Available
-PBM Motif Data for Dobox5
Primary Motif  (Seed-and-Wobble)
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Primary PWM
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Top Kmer
GGGATTAA (E.S. 0.49882)
TTAATCCC (E.S. 0.49882)
Primary Motif  (BEEML-PBM)
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Primary PWM
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Consensus
NNTAAKCYNN
NNRGMTTANN
Downloads
Download the zip of all Dobox5 PBM files or view the downloads directory for individual files. Please note that the files which include probe sequence data are protected by an academic research use license, which can be viewed here.
Link to TFBSshape
This link will take you to the corresponding entry for Dobox5 in TFBSshape, a database which provides information about the shape of the DNA at transcription factor binding sites.

http://rohslab.cmb.usc.edu/TFBSshape/?tfid=&geneID=143&sourceDB=uniprobe
-Dobox5 Datasets
Clone ID Expression Expression Method Save View
pTH3493 #1 IVT save search
Clone pTH3493 insert sequence
1   DKYGDKQTGP MTSRKLRKQH TVYSKEQQHL LKEHFKECQY PNEKKIVELA
51  VLVGVTKMEI KIWMNLQNIK QALPETNGSS KAVSESTHFP GSI
References
Data are analyzed by array design with AMADID # 015681 in Berger et al., Cell 2008


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