-Genomic Data Links
Protein
Barhl2
UniPROBE Accession Number
UP00145
Species
Mus musculus
Domain
Homeobox
Uniprot
Q8VIB5
Name and Synonyms
BarH-like 2 (Drosophila)
Bar-class homeodomain protein MBH1, Barh1, BarH-like 2 homeobox protein, Homeobox protein B-H1, Mbh1
IHOP
144674
Description
None Available
RefSeq
None Available
Barhl2 DNA binding domain
1   RKARTAFSDH QLNQLERSFE RQKYLSVQDR MDLAAALNLT DTQVKTWYQN
51  RRTKWKR
JASPAR
None Available
-PBM Motif Data for Barhl2
Primary Motif  (Seed-and-Wobble)
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Primary PWM
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Top Kmer
AA.CAATTA (E.S. 0.49752)
TAATTG.TT (E.S. 0.49752)
Primary Motif  (BEEML-PBM)
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Primary PWM
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Consensus
NTAAWNRNNN
NNNYNWTTAN
Downloads
Download the zip of all Barhl2 PBM files or view the downloads directory for individual files. Please note that the files which include probe sequence data are protected by an academic research use license, which can be viewed here.
Link to TFBSshape
This link will take you to the corresponding entry for Barhl2 in TFBSshape, a database which provides information about the shape of the DNA at transcription factor binding sites.

http://rohslab.cmb.usc.edu/TFBSshape/?tfid=&geneID=145&sourceDB=uniprobe
-Barhl2 Datasets
Clone ID Expression Expression Method Save View
pTH3868 #1 IVT save search
Clone pTH3868 insert sequence
1   EITSSRESPP VRAKKPRKAR TAFSDHQLNQ LERSFERQKY LSVQDRMDLA
51  AALNLTDTQV KTWYQNRRTK WKRQTAVGLE LLAEAGNYSA LQR
References
Data are analyzed by array design with AMADID # 015681 in Berger et al., Cell 2008


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