-Genomic Data Links
Protein
Emx2
UniPROBE Accession Number
UP00201
Species
Mus musculus
Domain
Homeobox
Uniprot
Q04744
Name and Synonyms
empty spiracles homolog 2 (Drosophila)
Empty spiracles homolog 2, Empty spiracles-like protein 2, Emx-2, Homeobox protein EMX2
IHOP
120794
Description
None Available
RefSeq
NP_034262
Emx2 DNA binding domain
1   KRIRTAFSPS QLLRLEHAFE KNHYVVGAER KQLAHSLSLT ETQVKVWFQN
51  RRTKFKR
JASPAR
None Available
-PBM Motif Data for Emx2
Primary Motif  (Seed-and-Wobble)
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Primary PWM
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Top Kmer
CTAATTAG (E.S. 0.49921)
CTAATTAG (E.S. 0.49921)
Primary Motif  (BEEML-PBM)
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Primary PWM
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Consensus
NNNHNATTAN
NTAATNDNNN
Downloads
Download the zip of all Emx2 PBM files or view the downloads directory for individual files. Please note that the files which include probe sequence data are protected by an academic research use license, which can be viewed here.
Link to TFBSshape
This link will take you to the corresponding entry for Emx2 in TFBSshape, a database which provides information about the shape of the DNA at transcription factor binding sites.

http://rohslab.cmb.usc.edu/TFBSshape/?tfid=&geneID=201&sourceDB=uniprobe
-Emx2 Datasets
Clone ID Expression Expression Method Save View
pTH3420 #1 E. coli save search
Clone pTH3420 insert sequence
1   TSPESFLLHN ALARKPKRIR TAFSPSQLLR LEHAFEKNHY VVGAERKQLA
51  HSLSLTETQV KVWFQNRRTK FKRQKLEEEG SDSQQKKKGT HHI
References
Data are analyzed by array design with AMADID # 015681 in Berger et al., Cell 2008


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