-Genomic Data Links
Protein
Pou2f1
UniPROBE Accession Number
UP00254
Species
Mus musculus
Domain
Homeobox, POU
Uniprot
P25425
Name and Synonyms
POU domain, class 2, transcription factor 1
2810482H01Rik, NF-A1, oct-1, Oct-1, Oct-1A, Oct-1B, Oct-1C, Oct-1L, Oct-1z, Octamer-binding transcription factor 1, Otf1, Otf-1, OTF-1
IHOP
123674
Description
None Available
RefSeq
NP_035267
Pou2f1 DNA binding domain
1   RKKRTSIETN IRVALEKSFM ENQKPTSEDI TLIAEQLNME KEVIRVWFCN
51  RRQKEKR
JASPAR
None Available
-PBM Motif Data for Pou2f1
Primary Motif  (Seed-and-Wobble)
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Primary PWM
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Top Kmer
A.A.TAATTA (E.S. 0.49411)
TAATTA.T.T (E.S. 0.49411)
Primary Motif  (BEEML-PBM)
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Primary PWM
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Consensus
NNNWWATKHN
NDMATWWNNN
Downloads
Download the zip of all Pou2f1 PBM files or view the downloads directory for individual files. Please note that the files which include probe sequence data are protected by an academic research use license, which can be viewed here.
Link to TFBSshape
This link will take you to the corresponding entry for Pou2f1 in TFBSshape, a database which provides information about the shape of the DNA at transcription factor binding sites.

http://rohslab.cmb.usc.edu/TFBSshape/?tfid=&geneID=254&sourceDB=uniprobe
-Pou2f1 Datasets
Clone ID Expression Expression Method Save View
pTH3081 #1 E. coli save search
Clone pTH3081 insert sequence
1    PQSQSTPKRI DTPSLEEPSD LEELEQFAKT FKQRRIKLGF TQGDVGLAMG
51   KLYGNDFSQT TISRFEALNL SFKNMCKLKP LLEKWLNDAE NLSSDSTASS
101  PSALNSPGLG AEGLNRRRKK RTSIETNIRV ALEKSFMENQ KPTSEDITLI
151  AEQLNMEKEV IRVWFCNRRQ KEKRINPPSS GGTSSSPIKA IFPS
References
Data are analyzed by array design with AMADID # 015681 in Berger et al., Cell 2008


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