-Genomic Data Links
Protein
Pitx3
UniPROBE Accession Number
UP00265
Species
Mus musculus
Domain
Homeobox
Uniprot
O35160
Name and Synonyms
paired-like homeodomain transcription factor 3
ak, Homeobox protein PITX3, Pituitary homeobox 3, Ptx3
IHOP
123560
Description
None Available
RefSeq
NP_032878
Pitx3 DNA binding domain
1   RRQRTHFTSQ QLQELEATFQ RNRYPDMSTR EEIAVWTNLT EARVRVWFKN
51  RRAKWRK
JASPAR
None Available
-PBM Motif Data for Pitx3
Primary Motif  (Seed-and-Wobble)
Image Not Available. We apologize for the inconvenience.
Primary PWM
View       Save
Top Kmer
G.GGATTA.C (E.S. 0.49801)
G.TAATCC.C (E.S. 0.49801)
Primary Motif  (BEEML-PBM)
Image Not Available. We apologize for the inconvenience.
Primary PWM
View
Consensus
NNRGMTTANN
NNTAAKCYNN
Downloads
Download the zip of all Pitx3 PBM files or view the downloads directory for individual files. Please note that the files which include probe sequence data are protected by an academic research use license, which can be viewed here.
Link to TFBSshape
This link will take you to the corresponding entry for Pitx3 in TFBSshape, a database which provides information about the shape of the DNA at transcription factor binding sites.

http://rohslab.cmb.usc.edu/TFBSshape/?tfid=&geneID=265&sourceDB=uniprobe
-Pitx3 Datasets
Clone ID Expression Expression Method Save View
pTH3497 #1 E. coli save search
Clone pTH3497 insert sequence
1   SLPGGSPEDG SLKKKQRRQR THFTSQQLQE LEATFQRNRY PDMSTREEIA
51  VWTNLTEARV RVWFKNRRAK WRKRERSQQA ELCKGGFAAP LGG
References
Data are analyzed by array design with AMADID # 015681 in Berger et al., Cell 2008


Supported Browsers:IE 7.0.6001.18000, Firefox 3.5.11, Google Chrome 5.0.375.125 beta