Function get_magic_quotes_gpc() is deprecated
The error 'Function get_magic_quotes_gpc() is deprecated' occurred in the file '' on line 224.
Function get_magic_quotes_gpc() is deprecated
The error 'Function get_magic_quotes_gpc() is deprecated' occurred in the file '' on line 224.
Function get_magic_quotes_gpc() is deprecated
The error 'Function get_magic_quotes_gpc() is deprecated' occurred in the file '' on line 224.
Function get_magic_quotes_gpc() is deprecated
The error 'Function get_magic_quotes_gpc() is deprecated' occurred in the file '' on line 224.
Function get_magic_quotes_gpc() is deprecated
The error 'Function get_magic_quotes_gpc() is deprecated' occurred in the file '' on line 224.
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-Genomic Data for RPN4 |
Links |
- Protein
- RPN4
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- UniPROBE Accession Number
- UP00272
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- Species
- Saccharomyces cerevisiae
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- Domain
- zf-C2H2
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- Uniprot
- Q03465
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- Synonyms
- 26S proteasome regulatory subunit RPN4, D2840, Nuclear protein SON1, SON1, UB fusion degradation protein 5, UFD5, YDL020C
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- IHOP
- 31990
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- RefSeq
- NP_010264
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- Description
- Transcription factor that stimulates expression of proteasome genes; Rpn4p levels are in turn regulated by the 26S proteasome in a negative feedback control mechanism; RPN4 is transcriptionally reg...
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- SGD
-
YDL020C
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-PBM Motif Data |
- Primary Motif (Seed-and-Wobble)
-
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- Primary PWM
-
View
 
Save
|
- Top Kmer
-
CGCCACCC E.S. 0.466
GGGTGGCG E.S. 0.466
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- Primary Motif (BEEML-PBM) (AMADID # 015681)
-
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- Primary PWM
-
View
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- Consensus
-
NNNNNNNNNV
BNNNNNNNNN
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- Primary Motif (BEEML-PBM) (AMADID # 016060)
-
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- Primary PWM
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View
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- Consensus
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RNNNNNNNNN
NNNNNNNNNY
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- Downloads
-
Download the
zip
of all Rpn4 PBM files
or view the
downloads directory
for individual files.
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- Link to TFBSshape
-
This link will take you to the corresponding entry for Rpn4
in TFBSshape,
a database which provides information about the shape of the DNA at transcription factor binding sites.
http://rohslab.cmb.usc.edu/TFBSshape/?tfid=&geneID272&sourceDB=uniprobe
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-Annotations |
- Target Gene Functional Category Enrichment
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1) FunSpec analysis run with p<0.005 without Bonferroni correction
(view)
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2) FunSpec analysis run with p<0.05 with Bonferroni correction
(view)
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- Conditional Specificity
-
1) Specific conditions (view)
-
2) Condition categories (view)
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-RPN4 Datasets |
Clone ID |
Clone Type |
Last Modified |
Save |
View |
y1010
|
Full length clone |
2014-07-16 |
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- Insert sequence
- 1 MASTELSLKR TLTDILEDEL YHTNPGHSQF TSHYQNYHPN ASITPYKLVN
51 KNKENNTFTW NHSLQHQNES SAASIPPQQT YHFPIFNKYA DPTLTTTTSF 101 TTSEATANDR QINNVHLIPN EIKGASETPL QKTVNLKNIM KVSDPYVPTR 151 NTFNYDVKIS NDFFDNGDNL YGNDEEVLFY EDNYNPKMQW SLQDNSAAIN 201 NEDARAIFNN EFDSDDDDIS DDEEDEIEEN YLQQEQHQEE PLLSLDVTPI 251 SMFGSDQKTG RAKSSSHLFN EYSYVDSNMD SISSVVSEDL LDERGHEKIE 301 DEDEDNDLDE DDIYDISLLK NRRKQSFVLN KNTIDFERFP SPSTSANVPS 351 TATTGKRKPA KSSSNRSCVS NSNENGTLER IKKPTSAVVS SNASRRKLIN 401 YTKKHLSSHS STNSNSKPST ASPSAHTSSS DGNNEIFTCQ IMNLITNEPC 451 GAQFSRSYDL TRHQNTIHAK RKIVFRCSEC IKILGSEGYQ KTFSRLDALT 501 RHIKSKHEDL SLEQRQEVTK FAKANIGYVM G
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