Function get_magic_quotes_gpc() is deprecated
The error 'Function get_magic_quotes_gpc() is deprecated' occurred in the file '' on line 224.
Function get_magic_quotes_gpc() is deprecated
The error 'Function get_magic_quotes_gpc() is deprecated' occurred in the file '' on line 224.
Function get_magic_quotes_gpc() is deprecated
The error 'Function get_magic_quotes_gpc() is deprecated' occurred in the file '' on line 224.
Function get_magic_quotes_gpc() is deprecated
The error 'Function get_magic_quotes_gpc() is deprecated' occurred in the file '' on line 224.
Function get_magic_quotes_gpc() is deprecated
The error 'Function get_magic_quotes_gpc() is deprecated' occurred in the file '' on line 224.
|
-Genomic Data for GAT1 |
Links |
- Protein
- GAT1
|
- UniPROBE Accession Number
- UP00287
|
- Species
- Saccharomyces cerevisiae
|
- Domain
- GATA
|
- Uniprot
- P43574
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- Synonyms
- MEP80, NIL1, Transcriptional regulatory protein GAT1, YFL021W
|
- IHOP
- 31079
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- RefSeq
- NP_116632
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- Description
- Transcriptional activator of genes involved in nitrogen catabolite repression, member of the GATA family of DNA binding proteins; activity and localization regulated by nitrogen limitation and Ure2p
|
- SGD
-
YFL021W
|
-PBM Motif Data |
- Primary Motif (Seed-and-Wobble)
-
|
- Primary PWM
-
View
 
Save
|
- Top Kmer
-
CCTTATCG E.S. 0.497
CGATAAGG E.S. 0.497
|
- Primary Motif (BEEML-PBM) (AMADID # 015681)
-
|
- Primary PWM
-
View
|
- Consensus
-
NNNGATWNNN
NNNWATCNNN
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- Primary Motif (BEEML-PBM) (AMADID # 016060)
-
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- Primary PWM
-
View
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- Consensus
-
NNNGATANNN
NNNTATCNNN
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- Downloads
-
Download the
zip
of all Gat1 PBM files
or view the
downloads directory
for individual files.
|
- Link to TFBSshape
-
This link will take you to the corresponding entry for Gat1
in TFBSshape,
a database which provides information about the shape of the DNA at transcription factor binding sites.
http://rohslab.cmb.usc.edu/TFBSshape/?tfid=&geneID287&sourceDB=uniprobe
|
-Annotations |
- Target Gene Functional Category Enrichment
-
1) FunSpec analysis run with p<0.005 without Bonferroni correction
(view)
-
2) FunSpec analysis run with p<0.05 with Bonferroni correction
(view)
|
- Conditional Specificity
-
1) Specific conditions (view)
-
2) Condition categories (view)
|
-GAT1 Datasets |
Clone ID |
Clone Type |
Last Modified |
Save |
View |
y1112
|
DNA binding domain only |
2014-07-16 |
|
|
- Insert sequence
- 1 NPSPSIVKPG SRRNSSVRKK KPALKKIKSS TSVQSSATPP SNTSSNPDIK
51 CSNCTTSTTP LWRKDPKGLP LCNACGLFLK LHGVTRPLSL KTDIIKKRQR 101 SSTKINNNIT PPPSSSLNPG AAGKKKNYTA SVAAS
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