Function get_magic_quotes_gpc() is deprecated
The error 'Function get_magic_quotes_gpc() is deprecated' occurred in the file '' on line 224.
Function get_magic_quotes_gpc() is deprecated
The error 'Function get_magic_quotes_gpc() is deprecated' occurred in the file '' on line 224.
Function get_magic_quotes_gpc() is deprecated
The error 'Function get_magic_quotes_gpc() is deprecated' occurred in the file '' on line 224.
Function get_magic_quotes_gpc() is deprecated
The error 'Function get_magic_quotes_gpc() is deprecated' occurred in the file '' on line 224.
Function get_magic_quotes_gpc() is deprecated
The error 'Function get_magic_quotes_gpc() is deprecated' occurred in the file '' on line 224.
|
-Genomic Data for SRD1 |
Links |
- Protein
- SRD1
|
- UniPROBE Accession Number
- UP00304
|
- Species
- Saccharomyces cerevisiae
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- Domain
- GATA
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- Uniprot
- P09007
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- Synonyms
- Pre-rRNA-processing protein SRD1, Suppressor of rRNA-processing defect protein 1, YCR018C, YCR18C
|
- IHOP
- 30951
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- RefSeq
- NP_009944
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- Description
- Protein involved in the processing of pre-rRNA to mature rRNA; contains a C2/C2 zinc finger motif; srd1 mutation suppresses defects caused by the rrp1-1 mutation
|
- SGD
-
YCR018C
|
-PBM Motif Data |
- Primary Motif (Seed-and-Wobble)
-
|
- Primary PWM
-
View
 
Save
|
- Top Kmer
-
AGATCTAC E.S. 0.499
GTAGATCT E.S. 0.499
|
- Primary Motif (BEEML-PBM) (AMADID # 015681)
-
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- Primary PWM
-
View
|
- Consensus
-
NDAWCTVHNN
NNDBAGWTHN
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- Primary Motif (BEEML-PBM) (AMADID # 016060)
-
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- Primary PWM
-
View
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- Consensus
-
VRAWCTVNNN
NNNBAGWTYB
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- Downloads
-
Download the
zip
of all Srd1 PBM files
or view the
downloads directory
for individual files.
|
- Link to TFBSshape
-
This link will take you to the corresponding entry for Srd1
in TFBSshape,
a database which provides information about the shape of the DNA at transcription factor binding sites.
http://rohslab.cmb.usc.edu/TFBSshape/?tfid=&geneID304&sourceDB=uniprobe
|
-Annotations |
- Target Gene Functional Category Enrichment
-
1) FunSpec analysis run with p<0.005 without Bonferroni correction
(view)
-
2) FunSpec analysis run with p<0.05 with Bonferroni correction
(view)
|
- Conditional Specificity
-
1) Specific conditions (view)
-
2) Condition categories (view)
|
-SRD1 Datasets |
Clone ID |
Clone Type |
Last Modified |
Save |
View |
y1095
|
DNA binding domain only |
2014-07-16 |
|
|
- Insert sequence
- 1 QEANNLEGYH SCAQGTSRSA SITKKYSKKT TSRPKREKRQ TILPNGEIKE
51 CSKCKDTWTI QWRSGPDQNR ELCSPCGLAY GKRLKKENEK KRQAADKRID 101 RNNP
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