Protein Details

-Genomic Data for NDT80				Links
Protein NDT80	UniPROBE Accession Number UP00346	Species Saccharomyces cerevisiae	Domain NDT80_PhoG	Uniprot P38830
Synonyms DAS1, Meiosis-specific transcription factor NDT80, YHR124W				IHOP 36515
				RefSeq NP_011992
Description Meiosis-specific transcription factor required for exit from pachytene and for full meiotic recombination; activates middle sporulation genes; competes with Sum1p for binding to promoters containin...				SGD YHR124W

-PBM Motif Data
Primary Motif (Seed-and-Wobble)				Primary PWM View Save
Primary Motif (Seed-and-Wobble)				Top Kmer G.CACAAAA E.S. 0.499 TTTTGTG.C E.S. 0.499
Primary Motif (BEEML-PBM) (AMADID # 015681)				Primary PWM View
Primary Motif (BEEML-PBM) (AMADID # 015681)				Consensus NNNNNNNNNV BNNNNNNNNN
Primary Motif (BEEML-PBM) (AMADID # 016060)				Primary PWM View
Primary Motif (BEEML-PBM) (AMADID # 016060)				Consensus NNNNNNNNNY RNNNNNNNNN
Downloads Download the zip of all Ndt80 PBM files or view the downloads directory for individual files.
Link to TFBSshape This link will take you to the corresponding entry for Ndt80 in TFBSshape, a database which provides information about the shape of the DNA at transcription factor binding sites. http://rohslab.cmb.usc.edu/TFBSshape/?tfid=&geneID346&sourceDB=uniprobe

-Annotations
Target Gene Functional Category Enrichment 1) FunSpec analysis run with p<0.005 without Bonferroni correction (view) 2) FunSpec analysis run with p<0.05 with Bonferroni correction (view)
Conditional Specificity 1) Specific conditions (view) 2) Condition categories (view)

-NDT80 Datasets
Clone ID	Clone Type	Last Modified	Save	View
y1007	Full length clone	2014-07-16
Insert sequence 1 MNEMENTDPV LQDDLVSKYE RELSTEQEED TPVILTQLNE DGTTSNYFDK 51 RKLKIAPRST LQFKVGPPFE LVRDYCPVVE SHTGRTLDLR IIPRIDRGFD 101 HIDEEWVGYK RNYFTLVSTF ETANCDLDTF LKSSFDLLVE DSSVESRLRV 151 QYFAIKIKAK NDDDDTEINL VQHTAKRDKG PQFCPSVCPL VPSPLPKHQI 201 IREASNVRNI TKMKKYDSTF YLHRDHVNYE EYGVDSLLFS YPEDSIQKVA 251 RYERVQFASS ISVKKPSQQN KHFSLHVILG AVVDPDTFHG ENPGIPYDEL 301 ALKNGSKGMF VYLQEMKTPP LIIRGRSPSN YASSQRITVR TPSSVNSSQN 351 STKRKMPSMA QPSNESCLNA RPSKRRSKVA LGAPNSGASI SPIKSRQSTP 401 MEASKENEDP FFRPNKRVET LEHIQNKLGA LKNQCPDSSL KYPSSSSRGM 451 EGCLEKEDLV YSSSFSVNMK QIELKPARSF EHENIFKVGS LAFKKINELP 501 HENYDITIEK KSMEQNYLRP EIGSRSECKT SYGNELSLSN ISFSILPNSA 551 ENFHLETALF PATEEDVPRT FSRILETGSF QNYYQKMDAE NADRVYSKGV 601 KLIASGTLPS GIFNREELFE EDSFYKY