Protein Details

-Genomic Data for RTG3				Links
Protein RTG3	UniPROBE Accession Number UP00356	Species Saccharomyces cerevisiae	Domain HLH	Uniprot P38165
Synonyms Retrograde regulation protein 3, YBL0810, YBL103C				IHOP 32555
Synonyms Retrograde regulation protein 3, YBL0810, YBL103C				RefSeq NP_009447
Description Basic helix-loop-helix-leucine zipper (bHLH/Zip) transcription factor that forms a complex with another bHLH/Zip protein, Rtg1p, to activate the retrograde (RTG) and TOR pathways				SGD YBL103C

-PBM Motif Data
Primary Motif (Seed-and-Wobble)				Primary PWM View Save
Primary Motif (Seed-and-Wobble)				Top Kmer GCACGTGC E.S. 0.473 GCACGTGC E.S. 0.473
Primary Motif (BEEML-PBM) (AMADID # 015681)				Primary PWM View
Primary Motif (BEEML-PBM) (AMADID # 015681)				Consensus YNNNNNNNNN NNNNNNNNNR
Downloads Download the zip of all Rtg3 PBM files or view the downloads directory for individual files.
Link to TFBSshape This link will take you to the corresponding entry for Rtg3 in TFBSshape, a database which provides information about the shape of the DNA at transcription factor binding sites. http://rohslab.cmb.usc.edu/TFBSshape/?tfid=&geneID356&sourceDB=uniprobe

-Annotations
Target Gene Functional Category Enrichment 1) FunSpec analysis run with p<0.005 without Bonferroni correction (view) 2) FunSpec analysis run with p<0.05 with Bonferroni correction (view)
Conditional Specificity 1) Specific conditions (view) 2) Condition categories (view)

-RTG3 Datasets
Clone ID	Clone Type	Last Modified	Save	View
y1046	Full length clone	2014-07-16
Insert sequence 1 MMNNNESEAE NQRLLDELMN QTKVLQETLD FSLVTPTPHH NDDYKIHGSA 51 YPGGETPAQQ HEKLSYINTH NSNDNNNLMG SQARSNSQTP TASTIYEEAE 101 SQSSYLDDMF RTSQGGRPVT QNSISSIGQG PLRSSYSMAY DSPVDRAMNT 151 PLQQQEGLKA ELPHDFLFQH GTDDTMYNLT DDLSSSLSSS INSDMMTPNT 201 YSSSFSYNPQ SLGPASVSST YSPKVRSPSS SFRAGSFLSS SFRHGSINTP 251 RTRHTSISSN MTENIGPGSV PKILGGLTSD EKLRRKREFH NAVERRRREL 301 IKQKIKELGQ LVPPSLLNYD DLGKQIKPNK GIILDRTVEY LQYLAEILEI 351 QARKKKALLA KIKELEEKKS SVAALSPFTN NHHASSGQNN SENSEERIID 401 IRSVPNALMN EQNSKAELHN WEPPLYDSVG NHNHAGTMES HPHTNIHEEL 451 KEFLSGDLIE AEDNAKLMFG DDNSNPADYL LEFGSG