|
|
| -Genomic Data |
Links |
- Protein
- Zbtb12
|
- UniPROBE Accession Number
- UP00019
|
- Species
- Mus musculus
|
- Domain
- zf-C2H2
|
- Uniprot
-
Q6P6L4
|
- Name and Synonyms
-
zinc finger and BTB domain containing 12
Bat9, Bat-9, BC020447, G10, NG35
|
- IHOP
-
151033
|
- RefSeq
-
NP_942589
|
- Description
- Mus musculus zinc finger and BTB domain containing 12
|
- JASPAR
-
N/A
|
| -PBM Motif Data for Zbtb12 |
- Primary Motif (Seed-And-Wobble)
-
|
- Primary PWM
-
View
Save
|
- Top Kmer
-
GTTCTAGA E.S. 0.499
TCTAGAAC E.S. 0.499
|
- Secondary Motif (Seed-And-Wobble)
-
|
- Secondary PWM
-
View
Save
|
- Top Kmer
-
C.TTAGAAC E.S. 0.461
GTTCTAA.G E.S. 0.461
|
-
Motif (BEEML-PBM) (AMADID # 015681)
(clone pTH2932)
-
|
- PWM
-
View
|
- Consensus
-
BYTAGWACVY
RBGTWCTARV
|
-
Motif (BEEML-PBM) (AMADID # 016060) (clone pTH2932)
-
|
- PWM
-
View
|
- Consensus
-
GTTCTAGRNN
NNYCTAGAAC
|
- Downloads
-
Download the
zip
of all Zbtb12 PBM files
or view the
downloads directory
for individual files.
|
- Link to TFBSshape
-
This link will take you to the corresponding entry for Zbtb12
in TFBSshape,
a database which provides information about the shape of the DNA at transcription factor binding sites.
http://rohslab.cmb.usc.edu/TFBSshape/?tfid=&geneID=19&sourceDB=uniprobe
|
| -Zbtb12 Datasets |
| Clone ID |
Expression |
Array Version |
Expression Protocol |
Clone Type |
Last Modified |
Save |
View |
|
pTH2932 |
#1 |
AMADID #016060 |
E. coli |
DNA binding domain only |
2014-08-13 |
|
|
| Clone ID |
Expression |
Array Version |
Expression Protocol |
Clone Type |
Last Modified |
Save |
View |
|
pTH2932 |
#1 |
AMADID #015681 |
E. coli |
DNA binding domain only |
2014-08-13 |
|
|
- Clone pTH2932 insert sequence
- 1 GPLPGGFSSG NPLKNIKCTK CPEVFQGVEK LVFHMRAQHF IFMCPRCGKQ
51 FNHSSNLNRH MNVHRGVKSH SCGICGKCFT QKSTLHDHLN LHSGARPYRC
101 SYCDVRFAHK PAIRRHLKEQ HGKTTAENVL EAGLAE
- DNA Binding Domains (Pfam) for clone 2932
-
Region 42..64
1 FMCPRCGKQF NHSSNLNRHM NVH
-
-
Region 70..92
1 HSCGICGKCF TQKSTLHDHL NLH
-
Region 98..121
1 YRCSYCDVRF AHKPAIRRHL KEQH
|
- References
-
Data are analyzed by array designs with AMADID #s 016060, 015681 in Badis et al., Science 2009
|
|