-Genomic Data Links
Protein
Zfp281
UniPROBE Accession Number
UP00021
Species
Mus musculus
Domain
zf-C2H2
Name and Synonyms
Zinc finger protein 281
MGC70044, MGC7737
Description
Mus musculus zinc finger protein 281, mRNA
-PBM Motif Data for Zfp281
Primary Motif (Seed-And-Wobble)
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Primary PWM
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Top Kmer
CCC.CCCCC E.S. 0.499
GGGGG.GGG E.S. 0.499
Secondary Motif (Seed-And-Wobble)
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Secondary PWM
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Top Kmer
G..ACCCCCA E.S. 0.495
TGGGGGT..C E.S. 0.495
Motif (BEEML-PBM) (AMADID # 015681)   (clone pTH0973)
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PWM
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Consensus
NHWCCCCCHH
DDGGGGGWDN
Motif (BEEML-PBM) (AMADID # 016060) (clone pTH0973)
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PWM
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Consensus
DDGGGGGHNK
MNDCCCCCHH
Downloads
Download the zip of all Zfp281 PBM files or view the downloads directory for individual files.
Link to TFBSshape
This link will take you to the corresponding entry for Zfp281 in TFBSshape, a database which provides information about the shape of the DNA at transcription factor binding sites.

http://rohslab.cmb.usc.edu/TFBSshape/?tfid=&geneID=21&sourceDB=uniprobe

-Zfp281 Datasets
Clone ID Expression Array Version Expression Protocol Clone Type Last Modified Save View
pTH973 #1 AMADID #016060 E. coli DNA binding domain only 2014-08-13 save search
Clone ID Expression Array Version Expression Protocol Clone Type Last Modified Save View
pTH973 #1 AMADID #015681 E. coli DNA binding domain only 2014-08-13 save search
Clone pTH973 insert sequence
1    VGEGEGAVLS PSQKPHICDH CSAAFRSSYH LRRHVLIHTG ERPFQCSQCS
51   MGFIQKYLLQ RHEKIHSREK PFGCDQCSMK FIQKYHMERH KRTHSGEKPY
101  KCDTCQQYFS RTDRLLKHRR TCGEAIAKGA ASAEPGS

DNA Binding Domains (Pfam) for clone 973
Region 16..38
1   HICDHCSAAF RSSYHLRRHV LIH

Region 44..66
1   FQCSQCSMGF IQKYLLQRHE KIH

Region 72..94
1   FGCDQCSMKF IQKYHMERHK RTH

Region 100..122
1   YKCDTCQQYF SRTDRLLKHR RTC
References
Data are analyzed by array designs with AMADID #s 016060, 015681 in Badis et al., Science 2009


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