Protein Details

-Genomic Data				Links
Protein Gm397	UniPROBE Accession Number UP00042	Species Mus musculus	Domain zf-C2H2	Uniprot Q3URS2
Name and Synonyms gene model 397, (NCBI) LOC245109				IHOP 155638
Name and Synonyms gene model 397, (NCBI) LOC245109				RefSeq NP_001013787
Description Mus musculus similar to Zinc finger protein 58 (Zfp-58) (Zinc finger protein Mfg-1) (LOC212386), mRNA				JASPAR N/A

-PBM Motif Data for Gm397
Primary Motif (Seed-And-Wobble)				Primary PWM View Save
Primary Motif (Seed-And-Wobble)				Top Kmer TGTGCACA E.S. 0.499 TGTGCACA E.S. 0.499
Secondary Motif (Seed-And-Wobble)				Secondary PWM View Save
Secondary Motif (Seed-And-Wobble)				Top Kmer GCACACAC E.S. 0.498 GTGTGTGC E.S. 0.498
Motif (BEEML-PBM) (AMADID # 015681) (clone pTH1753)				PWM View
Motif (BEEML-PBM) (AMADID # 015681) (clone pTH1753)				Consensus NVTGKABNNN NNNVTMCABN
Motif (BEEML-PBM) (AMADID # 016060) (clone pTH1753)				PWM View
Motif (BEEML-PBM) (AMADID # 016060) (clone pTH1753)				Consensus NNNTGTGCNN NNGCACANNN
Downloads Download the zip of all Gm397 PBM files or view the downloads directory for individual files.
Link to TFBSshape This link will take you to the corresponding entry for Gm397 in TFBSshape, a database which provides information about the shape of the DNA at transcription factor binding sites. http://rohslab.cmb.usc.edu/TFBSshape/?tfid=&geneID=42&sourceDB=uniprobe

-Gm397 Datasets
Clone ID	Expression	Array Version	Expression Protocol	Clone Type	Last Modified	Save	View
pTH1753	#1	AMADID #016060	E. coli	DNA binding domain only	2014-08-13
Clone ID	Expression	Array Version	Expression Protocol	Clone Type	Last Modified	Save	View
pTH1753	#1	AMADID #015681	E. coli	DNA binding domain only	2014-08-13
Clone pTH1753 insert sequence `1 PCKSHQKRFC RDAKLYKCEE CSRMFKHARS LSSHQRTHLN KKSELLCVTC 51 QKMFKRVSDR RTHEIIHMPE KPFKCSTCEK SFSHKTNLKS HEMIHTGEMP 101 YVCSLCSRRF RQSSTYHRHL RNYHRSD` DNA Binding Domains (Pfam) for clone 1753 Region 16..38 `1 YKCEECSRMF KHARSLSSHQ RTH` Region 73..95 `1 FKCSTCEKSF SHKTNLKSHE MIH` Region 101..124 `1 YVCSLCSRRF RQSSTYHRHL RNYH`
References `Data are analyzed by array designs with AMADID #s 016060, 015681 in Badis et al., Science 2009`