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| -Genomic Data |
Links |
- Protein
- Tcfe2a
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- UniPROBE Accession Number
- UP00046
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- Species
- Mus musculus
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- Domain
- HLH
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- Uniprot
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P15806
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- Name and Synonyms
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transcription factor E2a
A1, AA408400, Alf2, ALF2, AW209082, E12, E12/E47, E2A, E47, Immunoglobulin enhancer-binding factor E12/E47, Me2, ME2, Pan1, Pan2, Tcf3, TCF3, TCF-3, Transcription factor 3, Transcription factor A1, Transcription factor E2-alpha, VDIR
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- IHOP
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125393
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- RefSeq
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NP_035678
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- Description
- None Available
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- JASPAR
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N/A
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| -PBM Motif Data for Tcfe2a |
- Primary Motif (Seed-And-Wobble)
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- Primary PWM
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View
Save
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- Top Kmer
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ACAGGTGC E.S. 0.497
GCACCTGT E.S. 0.497
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- Secondary Motif (Seed-And-Wobble)
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- Secondary PWM
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View
Save
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- Top Kmer
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CAGATGTC E.S. 0.492
GACATCTG E.S. 0.492
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Motif (BEEML-PBM) (AMADID # 015681)
(clone pTH3865)
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- PWM
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View
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- Consensus
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NVCACCTGBN
NVCAGGTGBN
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Motif (BEEML-PBM) (AMADID # 016060) (clone pTH3865)
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- PWM
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View
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- Consensus
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NVCAGGTGBN
NVCACCTGBN
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- Downloads
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Download the
zip
of all Tcfe2a PBM files
or view the
downloads directory
for individual files.
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- Link to TFBSshape
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This link will take you to the corresponding entry for Tcfe2a
in TFBSshape,
a database which provides information about the shape of the DNA at transcription factor binding sites.
http://rohslab.cmb.usc.edu/TFBSshape/?tfid=&geneID=46&sourceDB=uniprobe
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| -Tcfe2a Datasets |
| Clone ID |
Expression |
Array Version |
Expression Protocol |
Clone Type |
Last Modified |
Save |
View |
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pTH3865 |
#1 |
AMADID #016060 |
IVT |
DNA binding domain only |
2014-08-13 |
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| Clone ID |
Expression |
Array Version |
Expression Protocol |
Clone Type |
Last Modified |
Save |
View |
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pTH3865 |
#1 |
AMADID #015681 |
IVT |
DNA binding domain only |
2014-08-13 |
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- Clone pTH3865 insert sequence
- 1 HPEEGLTSGA SLLHNHASLP SQPSSLPDLS QRPPDSYSGL GRAGTTAGAS
51 EIKREEKEDE EIASVADAEE DKKDLKVPRT RTSSTDEVLS LEEKDLRDRE
101 RRMANNARER VRVRDINEAF RELGRMCQLH LKSDKAQTKL LILQQAVQVI
151 LGLEQQVRER NLNPKAACLK RREEEKVSGV VGDPQLPLSA AHPGLGEAHN
201 PAGHL
- DNA Binding Domains (Pfam) for clone 3865
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Region 101..154
1 RRMANNARER VRVRDINEAF RELGRMCQLH LKSDKAQTKL LILQQAVQVI
51 LGLE
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- References
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Data are analyzed by array designs with AMADID #s 016060, 015681 in Badis et al., Science 2009
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