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| -Genomic Data |
Links |
- Protein
- Gmeb1
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- UniPROBE Accession Number
- UP00084
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- Species
- Mus musculus
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- Domain
- SAND
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- Uniprot
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Q9JL60
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- Name and Synonyms
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glucocorticoid modulatory element binding protein 1
1110050A04Rik, AI256615, AI481278, Glucocorticoid modulatory element-binding protein 1, GMEB-1
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- IHOP
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129628
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- RefSeq
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NP_064669
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- Description
- transcription termination factor 1, mRNA (cDNA clone MGC:69635 IMAGE:6847867), complete cds
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- JASPAR
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N/A
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| -PBM Motif Data for Gmeb1 |
- Primary Motif (Seed-And-Wobble)
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- Primary PWM
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View
Save
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- Top Kmer
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TTACGTAA E.S. 0.494
TTACGTAA E.S. 0.494
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- Secondary Motif (Seed-And-Wobble)
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- Secondary PWM
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View
Save
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- Top Kmer
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CGACGTCG E.S. 0.480
CGACGTCG E.S. 0.480
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Motif (BEEML-PBM) (AMADID # 015681)
(clone pTH1745)
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- PWM
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View
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- Consensus
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NNNNRCGYNN
NNRCGYNNNN
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Motif (BEEML-PBM) (AMADID # 016060) (clone pTH1745)
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- PWM
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View
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- Consensus
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NNACGYNNNN
NNNNRCGTNN
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- Downloads
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Download the
zip
of all Gmeb1 PBM files
or view the
downloads directory
for individual files.
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- Link to TFBSshape
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This link will take you to the corresponding entry for Gmeb1
in TFBSshape,
a database which provides information about the shape of the DNA at transcription factor binding sites.
http://rohslab.cmb.usc.edu/TFBSshape/?tfid=&geneID=84&sourceDB=uniprobe
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| -Gmeb1 Datasets |
| Clone ID |
Expression |
Array Version |
Expression Protocol |
Clone Type |
Last Modified |
Save |
View |
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pTH1745 |
#1 |
AMADID #016060 |
E. coli |
DNA binding domain only |
2014-08-13 |
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| Clone ID |
Expression |
Array Version |
Expression Protocol |
Clone Type |
Last Modified |
Save |
View |
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pTH1745 |
#1 |
AMADID #015681 |
E. coli |
DNA binding domain only |
2014-08-13 |
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- Clone pTH1745 insert sequence
- 1 HSIHKIEEGI DASSIEGNED MEIAYPITCG ESKAVLLWKK FVCPGINVKC
51 VKFNDQLISP KHFVHLAGKS TLKDWKRAIR LGGIMLRKMM DSGQIDFYQH
101 DKVCSDTCRS T
- DNA Binding Domains (Pfam) for clone 1745
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Region 16..96
1 EGNEDMEIAY PITCGESKAV LLWKKFVCPG INVKCVKFND QLISPKHFVH
51 LAGKSTLKDW KRAIRLGGIM LRKMMDSGQI D
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- References
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Data are analyzed by array designs with AMADID #s 016060, 015681 in Badis et al., Science 2009
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