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| -Genomic Data for Msh |
Links |
- Protein
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- UniPROBE Accession Number
- UP00507
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- Species
- Drosophila melanogaster
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- Domain
- Homeobox
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- Swiss-Prot
- Q03372
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- Name and Synonyms
- Name: Muscle segmentation homeobox.
Synonyms:153515_at, 99B, CG1897, Dmel\CG1897, l(3)FA30, ltt, msh, msh1, msh-1, Msx, Muscle segmentation homeobox, Protein drop, Protein msh
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- IHOP
- 68932
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- NCBI RefSeq
- NP_477324
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- Description
- Msh plays a key role in the specification of proneural and promuscular cluster formation. It is required for the specification of dorsal and lateral muscle progenitor cells.
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- JASPAR
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MA0188.1
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| -PBM Motif Data for Msh |
- PBM-Derived DNA Binding Site Motif
(Seed-And-Wobble)
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- PWM
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Save
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- Top Kmer
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ACTAATTA E.S. 0.497
TAATTAGT E.S. 0.497
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- PBM-Derived DNA Binding Site Motif
(BEEML-PBM)
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- PWM
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Save
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- Consensus
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NNNYAATTAN
NTAATTRNNN
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- Downloads
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Download the
zip
of all Msh PBM files
or view the downloads directory for individual files.
Please note that the files which include probe sequence data are protected by an academic research use license,
which can be viewed here.
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| -Msh Datasets |
| Gene |
Clone Type |
Last Modified |
Save |
View |
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Msh |
DNA binding domain only |
2014-08-13 |
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- Msh Insert Sequence
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1 TRQMPPFGPP GMFPGAGFGG DANEPPRIKC NLRKHKPNRK PRTPFTTQQL
51 LSLEKKFREK QYLSIAERAE FSSSLRLTET QVKIWFQNRR AKAKRLQEAE
101 IEKIKMAALG RGAPGAQWAM AGYFHPSLMH L
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- References
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Data are analyzed by array design with AMADID # 015681 in Busser et al., Development 2012
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