Supplementary Information

McCord RP and Bulyk ML: “Functional Trends in Structural Classes of the DNA Binding Domains of Regulatory Transcription Factors”


Supplementary Figures (Excel file)

            Supplementary Figure 1: Relationship between TF motif information content and number of binding sites

            Supplementary Figure 2: Yeast paralog retention over structural classes.

 

Supplementary Tables:

            Supplementary Table 1:  List of all TFs and assigned structural classes for E. coli, yeast, fly, and mouse

            Supplementary Table 2:  Full functional attribute enrichments within structural classes for E. coli, yeast, fly,
and mouse TFs

            Supplementary Table 3: Full functional enrichment for yeast TF target genes by structural class

 

Scripts:

            ExpressionCoherence.m

            MotifCoherence.m